Appendix B. Applications and Packages Reference

Table of Contents

B.1. Applications and Packages Documentation
B.1.1. Online Documentation
B.1.1.1. Application Groups
B.1.1.2. EMBASSY Packages
B.1.1.3. Application Documentation
B.2. Application Groups (release R6)
B.3. EMBASSY Packages (release R6)
B.4. EMBOSS Applications (release R6)
B.5. EMBASSY Applications (release R6)
B.6. All Applications (by group)
B.6.1. Applications in group Acd
B.6.2. Applications in group Alignment:consensus
B.6.3. Applications in group Alignment:differences
B.6.4. Applications in group Alignment:dot plots
B.6.5. Applications in group Alignment:global
B.6.6. Applications in group Alignment:local
B.6.7. Applications in group Alignment:multiple
B.6.8. Applications in group Display
B.6.9. Applications in group Edit
B.6.10. Applications in group Enzyme kinetics
B.6.11. Applications in group Feature tables
B.6.12. Applications in group Information
B.6.13. Applications in group Nucleic:2d structure
B.6.14. Applications in group Nucleic:codon usage
B.6.15. Applications in group Nucleic:composition
B.6.16. Applications in group Nucleic:cpg islands
B.6.17. Applications in group Nucleic:gene finding
B.6.18. Applications in group Nucleic:motifs
B.6.19. Applications in group Nucleic:mutation
B.6.20. Applications in group Nucleic:primers
B.6.21. Applications in group Nucleic:profiles
B.6.22. Applications in group Nucleic:repeats
B.6.23. Applications in group Nucleic:restriction
B.6.24. Applications in group Nucleic:transcription
B.6.25. Applications in group Nucleic:translation
B.6.26. Applications in group Phylogeny:molecular sequence
B.6.27. Applications in group Protein:2d structure
B.6.28. Applications in group Protein:3d structure
B.6.29. Applications in group Protein:composition
B.6.30. Applications in group Protein:motifs
B.6.31. Applications in group Protein:mutation
B.6.32. Applications in group Protein:profiles
B.6.33. Applications in group Utils:database creation
B.6.34. Applications in group Utils:database indexing
B.6.35. Applications in group Utils:misc
B.6.36. Applications in group Distance matrix
B.6.37. Applications in group HMM
B.6.38. Applications in group RNA folding
B.6.39. Applications in group Discrete characters
B.6.40. Applications in group Tree drawing
B.6.41. Applications in group Menus
B.6.42. Applications in group Test
B.6.43. Applications in group Continuous characters
B.6.44. Applications in group Transcription
B.6.45. Applications in group Gene frequencies
B.6.46. Applications in group Phylogeny:Consensus
B.7. GCG to EMBOSS Comparison