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Difference between revisions of "Google Summer of Code 2010"
From Open Bioinformatics Foundation
(Created page with 'right|link=http://code.google.com/soc The OBF was accepted into the 2010 [http://code.google.com/soc Google Summer of Code] (GSoC) program as an um…') |
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== 2010 Funded Students and Projects (6 students) == | == 2010 Funded Students and Projects (6 students) == | ||
− | === BioJava | + | === Mark Chapman (BioJava) === |
− | + | * [http://biojava.org/wiki/GSoC:MSA Improvements including Implementation of Multiple Sequence Alignment Algorithms] | |
+ | * Mentor: [http://biojava.org/wiki/Andreas_Prlic Andreas Prlic] | ||
+ | * [http://biojava.org/wiki/Mark_Chapman Mark Chapman on BioJava] | ||
− | === BioJava | + | === Jianjiong Gao (BioJava) === |
− | + | * [http://www.biojava.org/wiki/GSoC:PTM Packages for Identification, Classification, and Visualization of Posttranslational Modification of Proteins] | |
+ | * Mentor: [http://www.linkedin.com/in/peterrose Peter Rose] | ||
+ | * [http://www.biojava.org/wiki/Jianjiong_Gao Jianjiong Gao on BioJava] | ||
− | === BioPerl | + | === Jun Yin (BioPerl) === |
− | + | * [http://bioperl.org/wiki/Google_Summer_of_Code#Alignment_Subsystem_Refactoring BioPerl Alignment Subsystem Refactoring] | |
+ | * Primary mentor [http://bioperl.org/wiki/User:Cjfields Chris Fields], secondary mentor [http://bioperl.org/wiki/User:Majensen Mark Jensen] | ||
+ | * [http://gsoc2010-junyin.blogspot.com/ Project overview and updates] | ||
− | === BioPython | + | === João Rodrigues (BioPython) === |
− | + | * [http://www.biopython.org/wiki/GSOC2010_Joao Extending Bio.PDB: broadening the usefulness of BioPython’s Structural Biology module] | |
+ | * Mentor: [http://eric.talevich.com/ Eric Talevich] | ||
+ | * [http://www.biopython.org/wiki/User:Joaor João Rodrigues on Biopython] | ||
+ | * [http://github.com/JoaoRodrigues/biopython/tree/GSOC2010 Project's Code on GitHub] | ||
− | + | João continues to be an active contributor to Biopython and maintains the Bio.PDB module. | |
− | + | === Kazuhiro Hayashi (BioRuby) === | |
− | + | * [http://gsoc2010kh.blogspot.com/ Ruby 1.9.2 support of BioRuby] | |
+ | * Mentor: Naohisa Goto | ||
− | + | === Sara Rayburn (BioRuby) === | |
+ | |||
+ | * [http://wiki.github.com/srayburn/bioruby/gsoc-2010-implementing-sdi-project-updates Implementing Speciation & Duplication Inference Algorithm for Binary and Non-binary Species Tree] | ||
+ | * Primary mentor [http://www.linkedin.com/in/cmzmasek Christian Zmasek], secondary mentor Diana Jaunzeikare |
Latest revision as of 07:48, 12 February 2014
The OBF was accepted into the 2010 Google Summer of Code (GSoC) program as an umbrella organization for all OBF-affiliated projects. Program Timeline.
Contents
2010 Funded Students and Projects (6 students)
Mark Chapman (BioJava)
- Improvements including Implementation of Multiple Sequence Alignment Algorithms
- Mentor: Andreas Prlic
- Mark Chapman on BioJava
Jianjiong Gao (BioJava)
- Packages for Identification, Classification, and Visualization of Posttranslational Modification of Proteins
- Mentor: Peter Rose
- Jianjiong Gao on BioJava
Jun Yin (BioPerl)
- BioPerl Alignment Subsystem Refactoring
- Primary mentor Chris Fields, secondary mentor Mark Jensen
- Project overview and updates
João Rodrigues (BioPython)
- Extending Bio.PDB: broadening the usefulness of BioPython’s Structural Biology module
- Mentor: Eric Talevich
- João Rodrigues on Biopython
- Project's Code on GitHub
João continues to be an active contributor to Biopython and maintains the Bio.PDB module.
Kazuhiro Hayashi (BioRuby)
- Ruby 1.9.2 support of BioRuby
- Mentor: Naohisa Goto
Sara Rayburn (BioRuby)
- Implementing Speciation & Duplication Inference Algorithm for Binary and Non-binary Species Tree
- Primary mentor Christian Zmasek, secondary mentor Diana Jaunzeikare