Difference between revisions of "Projects"

Revision as of 05:28, 15 November 2018

BioJS - an open-source library of JavaScript components to visualise biological data
BioHaskell home page, releases
Biocaml - bioinformatics library in the functional programming language OCaml
BioPHP
BioSmalltalk - Bioinformatics in a pure objects environment
BioWeka
BioClipse - visual platform based on Eclipse
CGL - Comparative Genomics Library
Wikiomics - Bioinformatics wiki
Pise - a tool to generate Web interfaces software for submitting jobs to these interfaces
OpenBQS - Bibliographic query system
BlipKit - Chris Mungall's Prolog toolkit for Bioinformatics and BioMedical Informatics
BioMake & Skam - Task management tool, similar to makefiles

Cyclone - provides an open source Java API to the pathway tool BioCyc.
GO-Perl - parsers and object model for OBO ontologies
Chaos-XML - File format based on the sequence modules of the Chado relational schema
Sequence Ontology
Gene Ontology
Obol

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 ==Affiliated projects==
-* [http://www.gmod.org/ggb Generic Genome Browser] - part of [http://www.gmod.org GMOD]
+* [http://gmod.org/wiki/GBrowse Generic Genome Browser] - part of [http://www.gmod.org GMOD]
-* [http://www.gmod.org/schema/ Chado] - The GMOD DB schema
+* [http://gmod.org/wiki/Chado Chado] - The GMOD DB schema
 ==Other related projects==