Difference between revisions of "Projects"

Revision as of 05:32, 15 November 2018

BioJS - an open-source library of JavaScript components to visualise biological data
BioHaskell home page, releases
Biocaml - bioinformatics library in the functional programming language OCaml
BioPHP
BioSmalltalk - Bioinformatics in a pure objects environment
CGL - Comparative Genomics Library
BioMake & Skam - Task management tool, similar to makefiles

Wikiomics - Bioinformatics wiki
Pise - a tool to generate Web interfaces software for submitting jobs to these interfaces
OpenBQS - Bibliographic query system
BioClipse - visual platform based on Eclipse
BioWeka
BlipKit - Chris Mungall's Prolog toolkit for Bioinformatics and BioMedical Informatics

Cyclone - provides an open source Java API to the pathway tool BioCyc.
GO-Perl - parsers and object model for OBO ontologies
Chaos-XML - File format based on the sequence modules of the Chado relational schema
Sequence Ontology
Gene Ontology
Obol

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 * [http://www.pasteur.fr/recherche/unites/sis/Pise/ Pise] - a tool to generate Web interfaces software for submitting jobs to these interfaces
 * [http://www.ebi.ac.uk/~senger/openbqs/ OpenBQS] - Bibliographic query system
+* [http://www.bioclipse.net/ BioClipse] - visual platform based on Eclipse
+* [http://bioweka.sourceforge.net/index.php/Main_Page BioWeka]
+* [http://blipkit.org BlipKit] - Chris Mungall's Prolog toolkit for Bioinformatics and BioMedical Informatics
 ==Ontologies and Definitions==